Posts
Projects
- Protein LLM Series Bridging ESM-3 protein embeddings with LLMs: architecture, scaling, and reinforcement learning.
- Autoresearch De Novo De novo protein binder design with Proteina-Complexa: beam search, config diversity, and sequence analysis.
Blog posts
2026
- EELMA Accepted to ICML 2026 03 May
- Protein LLM: Teaching Language Models to Understand Proteins 20 Mar
- Teaching a Protein LLM with Reinforcement Learning: The Gradient Routing Problem 13 Mar
- Protein LLM Part 2: Scaling to 4.9 Million Samples 07 Mar
- Building a Protein-Understanding LLM: A Week of Trials, Errors, and Breakthroughs 25 Feb
- Microbial Community Coalescence 11 Feb
- KG-R1: Efficient Knowledge Graph RAG via Reinforcement Learning 01 Jan
2025
- ICML Spotlight Paper Accepted 01 May
- A Systems Biology Approach to Multi-LLM Agent Systems 01 Feb
- Started MATS 01 Jan
- EELMA: Estimating the Empowerment of Language Model Agents 01 Jan